Castlevania: Aria of Sorrow - 2
Chrono Trigger - 2
Final Fantasy IV - 3
Fire Emblem 7 - 6 (including 1 Japanese playthrough for fun)
Golden Sun - 2
Kirby Super Star - a lot (probably at least 10 times)
Kirby 64 - 2
Legend of Zelda: A Link to the Past - 2
Legend of Zelda: Link's Awakening - 2
Legend of Zelda: Ocarina of Time - 2
Lufia II - 2
Luigi's Mansion - 2
Mega Man - 2
Mega Man 2 - 2
Mega Man 3 -2
Mega Man Battle Network - 2
Mega Man Battle Network 2 - 2
Mega Man Battle Network 3 - 2
Mega Man X - 2
Paper Mario - 2
Persona 3 - 2
Phoenix Wright: Ace Attorney - 2
Pokemon R/B/Y - 3
Pikmin - 2
Seiken Densetsu 3 - 3
Star Fox 64 - 5 (rough guess)
Super Mario RPG - 2
Tales of Symphonia - 2
Wario Ware, Inc: Mega MicroGame$ - 2
There may be more, but that's most of it.
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http://myanimelist.net/profile/WhiteLens