There are two 007: Nightfire on that list, each with 1 nomination.
On that note, I nominate
007: Nightfire
Ys: Ark of Napishtim
Guitar Hero III: Legends of Rock
MVP Baseball 2004
I think that's all the games I need to nominate now.
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2010 Game of the Decade Contest - some guy named Black Turtle won the guru for this
http://backloggery.com/articuno2001/sig.gif